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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015900836.1_cds_XP_016450863.1_45272
CDS Infomation

[gene=LOC107775627] [db_xref=GeneID:107775627] [protein=probable auxin efflux carrier component 1c] [protein_id=XP_016450863.1] [location=join(28295..29492,29602..29848,29961..30046,30696..30853,31726..31802,31898..31964)] [gbkey=CDS]
Sequence

ATGATAACTTTATCTGATTTCTACCATGTTATGACTGCTGTTGTGCCACTTTATGTGGCC
ATGATATTAGCATATGGTTCTGTTAAATGGTGGAAGATTTTTTCCCCCGACCAGTGTTCT
GGTATTAACAGATTTGTTGCACTTTTCGCAGTTCCACTTCTCTCTTTCCACTTTATAGCT
GGTAACAATCCTTATACAATGAATATACGGTTCATTGCTGCTGATACTCTTCAGAAACTT
ATTGTTCTTGGGGCTCTTGCTATTTGGGCTAATTTTAGCAAAAGGGGTAGTTTAGAATGG
AGTATAACACTCTTTTCTTTATCAACTCTTCCAAATACTTTAGTTATGGGTATTCCTTTG
TTAAAGGGAATGTATGGTGATTTTTCTGGAAGCTTAATGGTTCAAATAGTTGTACTACAG
TGTATTATTTGGTACACTTTGATGCTTTTTATGTTTGAGTTCAGAGGTGCAAGAATGCTG
ATTTCTGAGCAATTTCCAGATACTGCTGGTTCAATTGTTTCAATCCATGTTGATTCTGAT
GTCATGTCATTAGATGGTAGACAAGTTTTGGAAACTGAAGCTGAAGTGAAAGAAGATGGA
AAACTTCATGTTACTGTTAGAAAATCAAATGCCTCAAGGTCGGATATATTTTCAAGAAGG
TCACAGGGATTTTCTTCTACAACTCCAAGACCATCAAATTTAACAAATGCAGAGATTTAC
TCTCTACAATCTTCAAGAAATCCAACTCCAAGAGGTTCAAGTTTTAACCACACTGATTTT
TACTCAATGGTGGCTGGTGGGAGAAACTCAAACTTTGGTGCAAATGATGTTTATGGTATG
TCAGCTTCAAGAGGACCAACTCCTAGGCCTTCAAATTATGAGGAAGAAAGTGGAAAATCA
AGATTTAATTACAACCATGGAGCTGCAGCACAACAAAGTAGTAATAATAATAATAACACT
ACTCATTATCCAGCTCCAAATCCTGGTATGTTTTCACCTAGTAATGGTGCAAAAGCAGTG
GCTAGCACTAATAACAAGAAAGGTAACAAAGGAGAGGAAGGTGGTAAGGATCTTCATATG
TTTGTTTGGAGCTCAAGTGCTTCTCCTGTTTCTGATGTTTTTGGAGGTCATGATTATGGA
GCTAATTTAGACCAGACTGCAGCTAAGGATGTAAGAGTACCTATCTCTCCTGGAAAAGTT
GAAGGGCAAAGAAACAATCAAGAAAACTACATGGAGAGAGATGACTTCAGCTTTGCAAAT
AGAGATGCAGAAATGAATATTAACAACCAAGAAGGTGAAAAAGTTGGAGAAAATAAAGCA
AAGGTTATGCCTCCAACAAGTGTAATGACTAGGCTTATACTAATCATGGTTTGGAGGAAA
CTTATAAGAAATCCAAACACTTATTCAAGCTTGTTTGGTCTCACTTGGTCTCTAGTTTCA
TTCAGGTGGAATTTGAAGATGCCTGCTATAATTGCACAGTCCATATCTATACTGTCAGAT
GCAGGACTTGGCATGGCAATGTTCAGTCTAGGTCTGTTTATGGCTTTGCAACCAAGGATA
ATAGCATGTGGGAATTCTACAGCAGCTTTTGCAATGGCTGTGAGATTCCTTACAGGTCCA
GCTGTTATGGCAGCTTCTTCCATTGCTGTTGGCCTTCGTGGAGTTCTCCTACACGTTGCA
ATTGTACAGGCAGCTCTACCGCAAGGAATTGTTCCCTTTGTCTTCGCCAAGGAATACAAC
GTTCACCCTGACATTCTTAGCACGGGTGTCATTTTTGGGATGTTGATTGCGTTGCCGATA
ACACTGGTCTACTACATTTTGATGGGACTTTGA

Peptide Sequence

PEP ID

XP_016450863.1
PEP Infomation

PREDICTED: probable auxin efflux carrier component 1c [Nicotiana tabacum]
Sequence

MITLSDFYHVMTAVVPLYVAMILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFIA
GNNPYTMNIRFIAADTLQKLIVLGALAIWANFSKRGSLEWSITLFSLSTLPNTLVMGIPL
LKGMYGDFSGSLMVQIVVLQCIIWYTLMLFMFEFRGARMLISEQFPDTAGSIVSIHVDSD
VMSLDGRQVLETEAEVKEDGKLHVTVRKSNASRSDIFSRRSQGFSSTTPRPSNLTNAEIY
SLQSSRNPTPRGSSFNHTDFYSMVAGGRNSNFGANDVYGMSASRGPTPRPSNYEEESGKS
RFNYNHGAAAQQSSNNNNNTTHYPAPNPGMFSPSNGAKAVASTNNKKGNKGEEGGKDLHM
FVWSSSASPVSDVFGGHDYGANLDQTAAKDVRVPISPGKVEGQRNNQENYMERDDFSFAN
RDAEMNINNQEGEKVGENKAKVMPPTSVMTRLILIMVWRKLIRNPNTYSSLFGLTWSLVS
FRWNLKMPAIIAQSISILSDAGLGMAMFSLGLFMALQPRIIACGNSTAAFAMAVRFLTGP
AVMAASSIAVGLRGVLLHVAIVQAALPQGIVPFVFAKEYNVHPDILSTGVIFGMLIALPI
TLVYYILMGL

Transcript Sequence

Gene sequence data has not been registered.